BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A03LP1|AL429495
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1740 0.0
3x_Contig1566 817 0.0
3x_Contig1138 794 0.0
3x_Contig1399 153 7e-37
>3x_Contig1302
Length = 5215
Score = 1740 bits (877), Expect = 0.0
Identities = 888/891 (99%), Gaps = 1/891 (0%)
Strand = Plus / Plus
Query: 1 acttaacgacgtggngagaagacttcggacttgatgacggcaccagctggcaaaccgacc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 acttaacgacgtgg-gagaagacttcggacttgatgacggcaccagctggcaaaccgacc 1522
Query: 61 aatacgacagttccagttggtctgacgaattgagtggaagcgttcatggcagcttcagaa 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 aatacgacagtaccagttggtctgacgaattgagtggaagcgttcatggcagcttcagaa 1582
Query: 121 acagagacgttaatgacaccgtgtggaccaccgttggtgatttcttggatttcagcaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 acagagacgttaatgacaccgtgtggaccaccgttggtgatttcttggatttcagcaacc 1642
Query: 181 atgtccttggttttggtgaaatcaacaaaggcttcaccacccaattgcttgaccaactta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 atgtccttggttttggtgaaatcaacaaaggcttcaccacccaattgcttgaccaactta 1702
Query: 241 cccttttcttcaccaccgtcgataccaacgactctgtaacccatggccttggcgtattgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1703 cccttttcttcaccaccgtcgataccaacgactctgtaacccatggccttggcgtattgg 1762
Query: 301 acagctagagaacctagaccaccagcagcaccagagatggcaacccagtcaccagccttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1763 acagctagagaacctagaccaccagcagcaccagagatggcaacccagtcaccagccttc 1822
Query: 361 aagttagcacttttcaaagccttgtaaacagtaacaccggcacatagaattggagcaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1823 aagttagcacttttcaaagccttgtaaacagtaacaccggcacatagaattggagcaact 1882
Query: 421 tcagccaaatcggtaccctttggaattctggcagcttgaacagcatctgcggtagcgtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 tcagccaaatcggtaccctttggaattctggcagcttgaacagcatctgcggtagcgtat 1942
Query: 481 tgttggaaagaaccatcgtgggtgtwaccagacaagtcagcatctggacagttggattca 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1943 tgttggaaagaaccatcgtgggtgtaaccagacaagtcagcatctggacagttggattca 2002
Query: 541 ttggacaattcacagtattcacaggacatacaagaaccgttcaaccatttgatacccgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2003 ttggacaattcacagtattcacaggacatacaagaaccgttcaaccatttgatacccgca 2062
Query: 601 aagtcaccaatgttccagcccttgacgttttcacccatagcaacaacgacaccagcacct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2063 aagtcaccaatgttccagcccttgacgttttcacccatagcaacaacgacaccagcacct 2122
Query: 661 tcgtgaccaccgaccaatggcaacttggttggcaatggccagtcacccttccatgcgtgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2123 tcgtgaccaccgaccaatggcaacttggttggcaatggccagtcacccttccatgcgtgc 2182
Query: 721 aaatcggtatgacacacaccggagtacttgacgttgatcaagatttcatttggctttggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2183 aaatcggtatgacacacaccggagtacttgacgttgatcaagatttcatttggctttggc 2242
Query: 781 tttggaactggaatgtccttgtattccaatttaccaccattctcatagaaaataacaccc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 tttggaactggaatgtccttgtattccaatttaccaccattctcatagaaaataacaccc 2302
Query: 841 ttttgggtttctggcacagaggtagctaaggttctgatggaaccaaaagca 891
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2303 ttttgggtttctggcacagaggtagctaaggttctgatggaaccaaaagca 2353
>3x_Contig1566
Length = 10355
Score = 817 bits (412), Expect = 0.0
Identities = 539/582 (92%)
Strand = Plus / Plus
Query: 270 gactctgtaacccatggccttggcgtattggacagctagagaacctagaccaccagcagc 329
||||||||||||||| |||||||||||||||| ||| | |||||||||||||||| ||
Sbjct: 7321 gactctgtaacccatagccttggcgtattggatagccaaagaacctagaccaccacaggc 7380
Query: 330 accagagatggcaacccagtcaccagccttcaagttagcacttttcaaagccttgtaaac 389
||| || ||||||||||||||||| |||||||||| |||| ||| | ||||||||||||
Sbjct: 7381 accggaaatggcaacccagtcaccggccttcaagtcagcagattttagagccttgtaaac 7440
Query: 390 agtaacaccggcacatagaattggagcaacttcagccaaatcggtaccctttggaattct 449
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7441 ggtaacaccggcacatagaattggagcaacttcagccaaatcggtaccctttggaattct 7500
Query: 450 ggcagcttgaacagcatctgcggtagcgtattgttggaaagaaccatcgtgggtgtwacc 509
||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| |||
Sbjct: 7501 agcagcttgaacggcatcagcggtagcatattgttggaaagaaccatcgtgggtgtaacc 7560
Query: 510 agacaagtcagcatctggacagttggattcattggacaattcacagtattcacaggacat 569
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7561 agacaagtcagcatcgggacagttggattcattggacaattcacagtattcacaggacat 7620
Query: 570 acaagaaccgttcaaccatttgatacccgcaaagtcaccaatgttccagcccttgacgtt 629
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 7621 acaagaaccgttcaaccatttgataccagcaaagtcaccaatgttccagcccttgacatt 7680
Query: 630 ttcacccatagcaacaacgacaccagcaccttcgtgaccaccgaccaatggcaacttggt 689
|||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 7681 ttcacccatagcaacaacgacaccagcaccttcgtgaccaccaactaatggcaatttggt 7740
Query: 690 tggcaatggccagtcacccttccatgcgtgcaaatcggtatgacacacaccggagtactt 749
|||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 7741 tggcaaaggccagtcacccttccatgcgtgcaaatcggtgtgacagacaccggagtactt 7800
Query: 750 gacgttgatcaagatttcatttggctttggctttggaactggaatgtccttgtattccaa 809
|||||||||||| | ||| || | |||||||||||||||||||||||||||||||| |||
Sbjct: 7801 gacgttgatcaaaagttcgttggcctttggctttggaactggaatgtccttgtattgcaa 7860
Query: 810 tttaccaccattctcatagaaaataacacccttttgggtttc 851
|| |||||| || || || || |||||||||||||| |||||
Sbjct: 7861 ttcaccaccgttttcgtaaaagataacacccttttgagtttc 7902
>3x_Contig1138
Length = 5524
Score = 794 bits (400), Expect = 0.0
Identities = 596/662 (90%)
Strand = Plus / Plus
Query: 193 ttggtgaaatcaacaaaggcttcaccacccaattgcttgaccaacttacccttttcttca 252
||||||||||||| ||| |||||||||||| | ||||| ||||||| |||||||||||
Sbjct: 4196 ttggtgaaatcaatgaagtattcaccacccaagtccttgaacaacttagccttttcttca 4255
Query: 253 ccaccgtcgataccaacgactctgtaacccatggccttggcgtattggacagctagagaa 312
||| | |||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4256 ccagcatcgatacccaacactctgtaacccatggccttggcgtattggacagctagagaa 4315
Query: 313 cctagaccaccagcagcaccagagatggcaacccagtcaccagccttcaagttagcactt 372
||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 4316 cctagaccaccagcagcaccagagatggcgacccagtcaccggccttcaagttggcggat 4375
Query: 373 ttcaaagccttgtaaacagtaacaccggcacatagaattggagcaacttcagccaaatcg 432
|| | ||||||||||| || ||||| |||||||| | |||||||||||||||||| ||
Sbjct: 4376 tttagggccttgtaaacggtgacaccagcacatagcactggagcaacttcagccaagtca 4435
Query: 433 gtaccctttggaattctggcagcttgaacagcatctgcggtagcgtattgttggaaagaa 492
||||| ||| || ||||||||||||| ||||| || |||||||||||||||||||||
Sbjct: 4436 gtaccgactgggatcttggcagcttgaacggcatcagcagtagcgtattgttggaaagaa 4495
Query: 493 ccatcgtgggtgtwaccagacaagtcagcatctggacagttggattcattggacaattca 552
|| ||||| |||| ||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 4496 ccgtcgtgagtgtaaccggacaagtcagcttctggacagttggattcgttggacaattca 4555
Query: 553 cagtattcacaggacatacaagaaccgttcaaccatttgatacccgcaaagtcaccaatg 612
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 4556 cagtattcacaggacatacaagaaccgttcaaccatttgataccagcgaagtcaccaatc 4615
Query: 613 ttccagcccttgacgttttcacccatagcaacaacgacaccagcaccttcgtgaccaccg 672
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4616 ttccagcccttgacgttttcacccatagcaacaacgacaccagcaccttcgtgaccacca 4675
Query: 673 accaatggcaacttggttggcaatggccagtcacccttccatgcgtgcaaatcggtatga 732
|| |||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 4676 actaatggcaatttggttggcaaaggccagtcacccttccatgcgtgcaaatcggtgtga 4735
Query: 733 cacacaccggagtacttgacgttgatcaagatttcatttggctttggctttggaactgga 792
|| |||||||||||||||||||||||||| | ||| || | ||||||||||||||||||
Sbjct: 4736 cagacaccggagtacttgacgttgatcaaaagttcgttagcctttggctttggaactggg 4795
Query: 793 atgtccttgtattccaatttaccaccattctcatagaaaataacacccttttgggtttct 852
||||||||||||| ||||| |||||| || || ||||| |||||||||||||| ||||||
Sbjct: 4796 atgtccttgtattgcaattcaccaccgttttcgtagaagataacacccttttgagtttct 4855
Query: 853 gg 854
||
Sbjct: 4856 gg 4857
>3x_Contig1399
Length = 7157
Score = 153 bits (77), Expect = 7e-37
Identities = 230/281 (81%)
Strand = Plus / Minus
Query: 124 gagacgttaatgacaccgtgtggaccaccgttggtgatttcttggatttcagcaaccatg 183
|||||||||||||||||||| |||||||||||||| ||||||||| || || ||||||
Sbjct: 300 gagacgttaatgacaccgtgaggaccaccgttggtagcttcttggatatcggcgaccatg 241
Query: 184 tccttggttttggtgaaatcaacaaaggcttcaccacccaattgcttgaccaacttaccc 243
||||| | || |||| || | ||| |||||||||| ||||||||| ||| | ||
Sbjct: 240 tccttagactttctgaagtcgatgaagacttcaccaccacattgcttgaacaattcttcc 181
Query: 244 ttttcttcaccaccgtcgataccaacgactctgtaacccatggccttggcgtattggaca 303
|| | ||||||||||| ||||| | |||||| |||||||||||||||||||||| |||
Sbjct: 180 ttaccatcaccaccgtcaatacctaggactctcaaacccatggccttggcgtattgcaca 121
Query: 304 gctagagaacctagaccaccagcagcaccagagatggcaacccagtcaccagccttcaag 363
|| || ||||||| |||||| |||||||| ||||| |||||||| | || | ||||||
Sbjct: 120 gcaagggaacctaaaccaccggcagcaccggagatagcaacccattggcctggtttcaag 61
Query: 364 ttagcacttttcaaagccttgtaaacagtaacaccggcaca 404
| ||| | | ||||||||||||||| ||||||||||||||
Sbjct: 60 tcagcggtctacaaagccttgtaaacggtaacaccggcaca 20
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5887
Number of Sequences: 1807
Number of extensions: 5887
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 4
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)